High Performance Computing

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Contents

Eos

Eos is a 32 processor (eight quad-core) AMD Opteron server with 256 GB of memory.

Hardware

  • Sun X4600 M2 Server
  • Eight quad-core AMD Opteron 8384 Processors (2.7 Ghz, 32 cores total)
  • 512KB L2 cache per core, 6MB L3 shared cache per socket
  • 256GB 667MHz ECC DDR2 memory

Software

  • OS: Ubuntu Server Edition 8.04.3 LTS AMD64
  • R 2.9.1
  • Matlab 2009a
  • SAS 9.2.0
  • Octave 3.0.0
  • Maxima 5.13.0
  • Grass 6.2.2
  • Gdal 1.4.4
  • GCC 4.2.4
  • BEAST 1.5.0
  • MUSCLE 3.7
  • PAUP 4.0b10
  • MrModeltest2 2.3

Helios

Helios is an 8 processor (four dual-core) AMD Opteron server with 32 GB of memory

Hardware

  • Sun V40z Server
  • Four dual-core AMD Opteron 875 processors (2.2 GHz, 8 cores total)
  • 1MB L2 cache per core
  • 32GB 333MHz ECC DDR memory

Software

  • OS: Red Hat Enterprise Linux 4 Advanced Server x86-64
  • R 2.9.0
  • Matlab 2007a
  • SAS 9.1.3
  • Mathematica 6.0
  • Octave 2.9.14
  • Maxima 5.9.2.99rc3
  • Grass 6.0.2
  • GCC 3.4.6
  • BEAST 1.4.8
  • MUSCLE 3.6
  • PAUP 4.0b10
  • MrModeltest2 2.2

Benchmarks

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